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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7288995 chr22:26668175 A/C EIF4ENIF1 chr22:31832963-31892094:- 0.62 6.17 1.46E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C EP300 chr22:41487790-41576083:+ 0.46 6.56 1.44E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C FAM10A4 chr13:50746154-50747749:+ 0.58 6.18 1.34E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C GTPBP1 chr22:39101728-39134304:+ 0.56 6.03 3.21E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C HSCB chr22:29138019-29153503:+ 0.58 6.72 5.06E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C L3MBTL2 chr22:41601209-41627275:+ 0.75 6.7 5.77E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C LMF2 chr22:50941378-50946120:- 0.61 6.91 1.57E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C LOC284900 chr22:28315364-28404267:+ 0.5 6.37 4.53E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C MCAT chr22:43528212-43539400:- 0.5 6.3 6.69E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C MPST chr22:37415676-37425863:+ 0.52 6.21 1.14E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C MTMR3 chr22:30279144-30426855:+ 0.58 6.47 2.5E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C MTP18 chr22:30805176-30825041:+ 0.63 6.77 3.68E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C NAGA chr22:42454358-42466846:- 0.62 5.89 7.33E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C NCAPH2 chr22:50946645-50961901:+ 0.61 6.67 7.01E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C NF2 chr22:29999545-30094587:+ 0.66 6.65 8.13E-11 Box Plot